Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACTTCCGCGGCTCCTATTCATACACGCAGG
((((((((((((..((((((.&))))))..)))))))).............)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175840
GeneSymbolSMOX
Binding site1442,1476
Score0.846
Seed1
Au0.382
Energy-25.7
Binding len34
Me-6.084
Phylopstem7.028835160000001
Phylopflank5.349307257500001
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end6
PositionCDS
2D Structure