Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAGGAAGGGGTGTGC
(((..((((((((((((((...&))))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_175849
GeneSymbolDNMT3B
Binding site3389,3407
Score0.846
Seed0
Au0.544
Energy-23.0
Binding len18
Me-11.089
Phylopstem-0.041387557142857134
Phylopflank0.1288783
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure