Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCCACGACCTGCCAGCTGTT
..((((((((((((((..(((&)))..)))))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175858
GeneSymbolKRTAP11-1
Binding site576,598
Score0.923
Seed1
Au0.441
Energy-19.8
Binding len22
Me-4.957
Phylopstem0.33577560000000006
Phylopflank0.6314806575
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end6
Position3UTR
2D Structure