Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTTATAGTGCTGAGCCAGGTA
(((((((.((((.(((((((..&))))))).)).)).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_175861
GeneSymbolTMTC1
Binding site4317,4339
Score0.846
Seed1
Au0.515
Energy-18.1
Binding len22
Me-7.54
Phylopstem-0.6528644285714285
Phylopflank0.12207944625
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end6
Position3UTR
2D Structure