Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACTTCTAGACACAGCTGCC
..(((((((..((((((((((&))))))).....))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175871
GeneSymbolSWSAP1
Binding site423,447
Score0.923
Seed1
Au0.368
Energy-21.6
Binding len24
Me-9.024
Phylopstem2.9278146533333334
Phylopflank1.2688653793750002
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end8
PositionCDS
2D Structure