Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCGCCGCTGCGGCTGCC
..(((((((((((.((..(((&)))...)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175873
GeneSymbolSOWAHA
Binding site335,356
Score0.846
Seed1
Au0.191
Energy-25.0
Binding len21
Me-5.814
Phylopstem-0.016786018181818164
Phylopflank0.315454003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure