Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAATCTGTAGTGGATGCAAG
(((((((((((((((((....&))))).)))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175874
GeneSymbolC12orf60
Binding site314,336
Score0.846
Seed1
Au0.676
Energy-17.3
Binding len22
Me-3.938
Phylopstem0.8515905714285714
Phylopflank0.29555616187500006
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure