Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTTGGCAGCCGGGCCAGGCAGCCCTGTGAAGGTGGCAGCTGCAGC
((((((((((((((((..(((&.)))..))))))...........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175875
GeneSymbolSIX5
Binding site1892,1940
Score0.846
Seed1
Au0.353
Energy-26.6
Binding len34
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure