Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATCAGCTGCAGGAAGCTGCAGC
(((((((((((((((...(((&)))..))))))))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175882
GeneSymbolSPPL2C
Binding site705,730
Score0.846
Seed1
Au0.412
Energy-22.4
Binding len25
Me-4.171
Phylopstem0.6100108052631579
Phylopflank1.0221933487499997
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure