Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGGAGAGCTGTGG
(((.(((((((((((((((...&)))))))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_175900
GeneSymbolC16orf54
Binding site303,323
Score1.0
Seed0
Au0.294
Energy-27.6
Binding len20
Me-6.97
Phylopstem-0.36521469187499983
Phylopflank-0.05572729850000002
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure