Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGGACTGCAGGTGCAT
.((((.((((((((....(((&)))..)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175900
GeneSymbolC16orf54
Binding site1895,1914
Score0.885
Seed0
Au0.515
Energy-21.3
Binding len19
Me-6.663
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end4
Position3UTR
2D Structure