Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCGGGGCCGGCTGCT
..(((((((...((((((((.&))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175902
GeneSymbolOGFOD3
Binding site3239,3258
Score0.846
Seed1
Au0.294
Energy-22.2
Binding len19
Me-12.371
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end7
Position3UTR
2D Structure