Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAACAGCCACAGCCACAC
.((..((((.((((((.((((&)))).)))))).))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175907
GeneSymbolPTGR3
Binding site3017,3038
Score0.846
Seed0
Au0.544
Energy-21.1
Binding len21
Me-12.187
Phylopstem-0.209823
Phylopflank-0.366457715
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure