Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGCTGGTGCGCTGCAC
.((((((.(((.(.(((.(((&))).))).).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175910
GeneSymbolZNF493
Binding site4588,4608
Score0.846
Seed1
Au0.544
Energy-19.8
Binding len20
Me-10.311
Phylopstem1.2215088333333333
Phylopflank2.38069864625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure