Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&AGAAGGGGGCCAGCGG
(.(((((((((((((.......&))))))))))))).).
Details
MiRNAhsa-miR-892b
RefseqIDNM_175913
GeneSymbolJPH2
Binding site27,43
Score0.808
Seed1
Au0.235
Energy-23.7
Binding len16
Me-5.334
Phylopstem-0.7650550923076923
Phylopflank-0.5435084857352941
Longest consecutive pairings13
Position of longest consecutive pairings3
Pairings in 3prime end1
Position5UTR
2D Structure