Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCCACTGCTGGCTGCC
..(((((((((((.((.(((.&))))).))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175913
GeneSymbolJPH2
Binding site1860,1879
Score0.846
Seed1
Au0.397
Energy-21.0
Binding len19
Me-5.814
Phylopstem0.27129041666666676
Phylopflank-1.3206451725000004
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure