Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCTCCTCCTTCTGCTGCTGCC
..(((((.((((..(((((((&)))))))........)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175914
GeneSymbolHNF4A
Binding site1913,1939
Score0.846
Seed0
Au0.353
Energy-21.4
Binding len26
Me-9.417
Phylopstem-0.24794385714285713
Phylopflank0.54958316125
Longest consecutive pairings7
Position of longest consecutive pairings19
Pairings in 3prime end7
Position3UTR
2D Structure