Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGCGATCCAGGGAAGATCAAGCGGCTGCGT
.(((((((((((((((..(((&)))..)))))).............))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175914
GeneSymbolHNF4A
Binding site942,976
Score1.0
Seed1
Au0.397
Energy-21.2
Binding len34
Me-3.793
Phylopstem0.4781304607142857
Phylopflank0.30688404625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure