Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGAGCTGTGACGGCTGCAAG
((((((((((((((...((((&))))..))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175914
GeneSymbolHNF4A
Binding site259,283
Score0.923
Seed1
Au0.382
Energy-21.3
Binding len24
Me-4.906
Phylopstem-0.3056246117647059
Phylopflank-0.09432534749999996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure