Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TACCATGAAGAAGAATAAATGAGGGTAAGGGGCTAGTGT
((((((((((((((..((((..&))))..)))..................))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_175921
GeneSymbolRIMOC1
Binding site4185,4224
Score0.923
Seed1
Au0.529
Energy-22.8
Binding len39
Me-4.906
Phylopstem0.29974415
Phylopflank0.2289545825
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure