Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTACTCCCGTGGCCGCAC
.(((.(((((((..(((((.(&).)))))..))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175921
GeneSymbolRIMOC1
Binding site1831,1852
Score1.0
Seed0
Au0.544
Energy-21.6
Binding len21
Me-10.058
Phylopstem2.382958714285714
Phylopflank3.33441624875
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end6
Position3UTR
2D Structure