Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGATTGTGGCCATGGCGGCCGCAGTC
.....(((((((((((..(((&.)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175921
GeneSymbolRIMOC1
Binding site11,39
Score0.846
Seed0
Au0.338
Energy-21.7
Binding len19
Me-13.666
Phylopstem0.20295952454545454
Phylopflank0.17166437837499998
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure