Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCACGCTGGGGCTAGCAGG
((((((((.((((((.(((((&))))))).)))).)))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_175932
GeneSymbolPSMD13
Binding site668,691
Score0.846
Seed1
Au0.441
Energy-21.4
Binding len23
Me-5.227
Phylopstem0.7360264
Phylopflank0.13485707375
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure