Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTTGCCAGGG
.(((((((.(((..........&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_176096
GeneSymbolCDK5RAP3
Binding site1032,1043
Score0.846
Seed1
Au0.412
Energy-15.5
Binding len11
Me-7.964
Phylopstem6.082567714285716
Phylopflank3.1345233874999994
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure