Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCGAGATGCGGGAGCAGTT
.(((.((((((.(((.(((((.&))))).)))...))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_176096
GeneSymbolCDK5RAP3
Binding site494,516
Score0.846
Seed0
Au0.382
Energy-24.1
Binding len22
Me-11.492
Phylopstem5.671234666666666
Phylopflank3.3605045749999993
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure