Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGATCAAGGATGTCATTGAGCAGCTCAACCTGGTCACCACCTGGTTGCAGCTGCAGA
(((((((((((((....((((&.))))....)))........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_176783
GeneSymbolPSME1
Binding site422,484
Score0.923
Seed1
Au0.5
Energy-23.0
Binding len31
Me-5.763
Phylopstem1.7130140952380952
Phylopflank1.2138614950000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure