Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAGAACTGCAGCA
.....(((((((((.((((((&))))).).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_176787
GeneSymbolPIGN
Binding site6644,6662
Score1.0
Seed0
Au0.588
Energy-21.2
Binding len18
Me-14.401
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure