Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAGCCCAGGACACTGGCCTGAGACTGTCTGCAGTTGCAC
.(((((((((((..((.((((&.))))...))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_176793
GeneSymbolMRPL43
Binding site507,550
Score0.846
Seed1
Au0.324
Energy-22.2
Binding len25
Me-5.939
Phylopstem4.4779302727272725
Phylopflank2.829189118504999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure