Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGACTGTCTGCAGTTGCAC
.(((((((((((..((.((((&))))...))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_176794
GeneSymbolMRPL43
Binding site653,677
Score0.846
Seed1
Au0.353
Energy-21.8
Binding len24
Me-5.939
Phylopstem4.026051636363636
Phylopflank2.0132437375000007
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure