Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGTTGCAGCTGTGGAAGGAGA
((.(..((((((((((((.((&)).))))))))))))..).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_176806
GeneSymbolMOCS2
Binding site127,149
Score0.846
Seed0
Au0.544
Energy-18.6
Binding len22
Me-11.515
Phylopstem0.663376925
Phylopflank0.2294232625
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end7
PositionCDS
2D Structure