Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTGCAACCAAATCTGCAC
.(((((....(((((((((((&)))))))))))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_176816
GeneSymbolCCDC125
Binding site2924,2945
Score1.0
Seed0
Au0.603
Energy-18.4
Binding len21
Me-9.95
Phylopstem2.954488818181818
Phylopflank4.223537782499999
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end8
Position3UTR
2D Structure