Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTGCTTGGCAAGCTGGGTC
(((((((...(((.(((((((.&))))))))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_176817
GeneSymbolTAS2R38
Binding site470,492
Score0.846
Seed1
Au0.441
Energy-17.9
Binding len22
Me-9.407
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure