Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGAGACAGGGGTCTCCCTCTGTCACCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((.((&.)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_176818
GeneSymbolGATC
Binding site1603,1649
Score0.846
Seed1
Au0.382
Energy-27.1
Binding len24
Me-10.109
Phylopstem0.10384174545454546
Phylopflank0.10582517499999998
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure