Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCCAAAACAGCAGCTGCT
..((((((((.(((.......&.))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_176818
GeneSymbolGATC
Binding site3679,3698
Score1.0
Seed1
Au0.574
Energy-18.9
Binding len14
Me-8.75
Phylopstem2.53966575
Phylopflank2.4874938337499994
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure