Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGGTGTCCCGGGCGCGCCCCGATGCGGCCGCGGCTGTG
..(((((((((((((((.((.&.))..))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349727
GeneSymbolCD8B2
Binding site39,80
Score1.0
Seed1
Au0.235
Energy-29.2
Binding len21
Me-4.957
Phylopstem-0.1930922666666667
Phylopflank-0.02167620967647066
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure