Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTACCAGCAGCAGTGTGTAAG
((((((((((.((((..(((.&)))..)))).))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_176823
GeneSymbolS100A7A
Binding site1572,1594
Score0.846
Seed1
Au0.588
Energy-18.4
Binding len22
Me-6.995
Phylopstem0.5283912909090909
Phylopflank1.1983857312500001
Longest consecutive pairings5
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure