Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTGCCTTCCAGTGGAAAGATTATCTCGTATCACACCTGTATTGGCCTGCCAGGA
.(((((((..((((((((....&.))))))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_176824
GeneSymbolBBS7
Binding site610,667
Score0.923
Seed1
Au0.529
Energy-19.6
Binding len20
Me-6.092
Phylopstem-0.5413149374999999
Phylopflank-0.50610723
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end4
PositionCDS
2D Structure