Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACTCATGCCAGA
..(((((((.....(((((...&)))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001349729
GeneSymbolNCSTN
Binding site2156,2171
Score0.846
Seed1
Au0.559
Energy-15.6
Binding len15
Me-14.517
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure