Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAATGGGATGCTGAAAAGCAACCAGCAGCTGG
...(((((((((((((.....&.)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_176863
GeneSymbolPSME3
Binding site546,581
Score0.923
Seed0
Au0.529
Energy-22.6
Binding len16
Me-6.515
Phylopstem-0.030435428571428568
Phylopflank1.1374629325
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure