Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGTTGGAGAACTGCAGCTGCT
..((((((((((((.(.....&.).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_176870
GeneSymbolMT1M
Binding site229,251
Score1.0
Seed1
Au0.426
Energy-23.6
Binding len16
Me-5.692
Phylopstem-0.25654116666666665
Phylopflank-0.053572837499999984
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure