Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACCGCGGCTCGAA
(((.(((((((((...(((((&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_176870
GeneSymbolMT1M
Binding site55,73
Score1.0
Seed0
Au0.441
Energy-21.9
Binding len18
Me-8.795
Phylopstem0.027104599999999996
Phylopflank-0.10000053624999998
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure