Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGGCCTGGCTCTAGGCTTGGGACTGCGGCTGCC
..((((((((((((.((((.(&.).)))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_176871
GeneSymbolPDLIM2
Binding site3869,3906
Score1.0
Seed1
Au0.324
Energy-27.5
Binding len21
Me-5.692
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure