Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAACACCATCCAGAAGACACAGAGGAGCAGCTGCAGA
((((((((((..((((.....&.))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_176877
GeneSymbolPATJ
Binding site5463,5503
Score0.949
Seed1
Au0.471
Energy-20.6
Binding len20
Me-10.109
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure