Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCTTCTGTGGCTGTC
..((((((((((..((.(((.&))).))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_176881
GeneSymbolTAS2R39
Binding site475,494
Score0.846
Seed1
Au0.544
Energy-21.0
Binding len19
Me-7.103
Phylopstem0.018226460000000035
Phylopflank0.24884465999999988
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure