Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTATACATGCAGCTGA
...((((((((..((((.(((&))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_176881
GeneSymbolTAS2R39
Binding site168,185
Score0.923
Seed0
Au0.603
Energy-17.8
Binding len17
Me-11.15
Phylopstem-0.9490663749999999
Phylopflank0.44542203750000003
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure