Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCGCTGGCCGCGCTGCAC
.((((((.((((((((..(((&)))..)).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177400
GeneSymbolNKX6-2
Binding site238,259
Score0.923
Seed1
Au0.353
Energy-23.4
Binding len21
Me-6.107
Phylopstem0.4003316666666666
Phylopflank0.82060359875
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure