Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCGTGTGGGCGACCACATGATGTTCGTGCAGCTGCAGC
(((((((((((..((((((((&)))))))).......................))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177401
GeneSymbolMIDN
Binding site908,951
Score0.846
Seed1
Au0.353
Energy-25.5
Binding len43
Me-8.574
Phylopstem-1.2132517272727272
Phylopflank-1.3940467374999996
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure