Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTTGAGACGGGCCTGGCTCTGTCACCCAGACTGGAGTGCAGTGG
((((((((((..(((((((.((&.)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001349757
GeneSymbolPRPF38B
Binding site4096,4141
Score0.923
Seed1
Au0.382
Energy-28.5
Binding len24
Me-10.109
Phylopstem0.7087065000000001
Phylopflank0.03815428125
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure