Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGGGAGCTCCACCCACCACCACTGCTGCTGCAGCTGTG
..(((((((((((.(((.(((&.)))..))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177415
GeneSymbolMAGEB1
Binding site416,459
Score0.923
Seed1
Au0.412
Energy-24.6
Binding len22
Me-5.814
Phylopstem-0.812228090909091
Phylopflank-0.017220593500000048
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure