Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCCCAATGGGACGGGCCAACGGTTGTGG
(((((((((.((((((((((((&))))))))..)))).))))))......))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_177423
GeneSymbolPPFIA1
Binding site2847,2878
Score0.846
Seed1
Au0.426
Energy-21.4
Binding len31
Me-5.18
Phylopstem6.133423571428571
Phylopflank2.8351886887499997
Longest consecutive pairings8
Position of longest consecutive pairings23
Pairings in 3prime end8
PositionCDS
2D Structure